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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02425

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
response regulator
Gene
—
Location
NZ_CGIH01000046.1:15,057–17,123 (+)   688 aa
Keys
gbid 1783727   gene_oid 2677390354   TM×2

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00512,pfam02518,pfam00072,pfam01627

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #260  pfam00072,pfam00512,pfam01627,pfam02518

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02425 ◀ 688 TM pfam00512,pfam02518,pfam00072,pfam01627
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01357 488 pfam00512,pfam02518,pfam00072,pfam01627
Syntrophomonas wolfei saponavida / SD2 Sws_00563 657 TM pfam00512,pfam02518,pfam00072,pfam01627
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00419 497 pfam00512,pfam02518,pfam00072,pfam01627
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00370 497 pfam00512,pfam02518,pfam00072,pfam01627
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