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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02071

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
uracil-DNA glycosylase
Gene
—
Location
NZ_CGIH01000036.1:17,390–18,088 (+)   232 aa
Keys
gbid 1783804   gene_oid 2677389984  

Domain architecture

Pfam domain
Pfam signature: pfam03167

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

14 proteins across 8 genomes share architecture group #1070  pfam03167

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00556 170 pfam03167
Syntrophomonas zehnderi OL-4 Szehn Szeh_01764 211 pfam03167
Syntrophomonas zehnderi OL-4 Szehn Szeh_02071 ◀ 232 pfam03167
Syntrophomonas curvata DSM15682 / GL#14 Scur_01623 172 pfam03167
Syntrophomonas curvata DSM15682 / GL#14 Scur_02382 229 pfam03167
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00142 237 pfam03167
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00629 237 pfam03167
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00189 237 pfam03167
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01130 209 pfam03167
Syntrophomonas wolfei saponavida / SD2 Sws_01373 258 pfam03167
Syntrophomonas wolfei saponavida / SD2 Sws_01509 178 pfam03167
Syntrophomonas wolfei saponavida / SD2 Sws_01645 230 pfam03167
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02171 229 pfam03167
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01901 233 pfam03167
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