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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02435

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
NAD-dependent DNA ligase LigA
Gene
ligA
Location
NZ_CGIH01000046.1:27,806–29,821 (−)   671 aa
Keys
gbid 1784115   gene_oid 2677390364  

Domain architecture

Pfam domain
Pfam signature: pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #250  pfam00533,pfam01653,pfam03119,pfam03120,pfam12826,pfam14520

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02435 ◀ 671 pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00360 661 pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
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