Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_02352

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
excinuclease ABC subunit UvrA
Gene
uvrA
Location
NZ_CGIH01000042.1:42,538–45,366 (−)   942 aa
Keys
gbid 1784481   gene_oid 2677390272  

Domain architecture

Pfam domain
Pfam signature: pfam17760,pfam17755

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #177  pfam17755,pfam17760

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02352 ◀ 942 pfam17760,pfam17755
Syntrophomonas curvata DSM15682 / GL#14 Scur_00311 940 pfam17760,pfam17755
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01947 955 pfam17760,pfam17755
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01315 955 pfam17760,pfam17755
Syntrophomonas wolfei saponavida / SD2 Sws_01334 958 pfam17760,pfam17755
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00228 946 pfam17760,pfam17755
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00250 942 pfam17760,pfam17755
↑ Top




v1.00 @copyright 2026 UCLA