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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02312

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
30S ribosomal protein S21
Gene
rpsU
Location
NZ_CGIH01000040.1:42,775–42,951 (+)   58 aa
Keys
gbid 1784489   gene_oid 2677390231  

Domain architecture

Pfam domain
Pfam signature: pfam01165

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #936  pfam01165

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02312 ◀ 58 pfam01165
Syntrophomonas curvata DSM15682 / GL#14 Scur_02036 58 pfam01165
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00305 58 pfam01165
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00465 58 pfam01165
Syntrophomonas wolfei saponavida / SD2 Sws_01989 58 pfam01165
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01773 58 pfam01165
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01599 58 pfam01165
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