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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02135

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
UbiA-like polyprenyltransferase
Gene
—
Location
NZ_CGIH01000038.1:46,376–47,224 (−)   282 aa
Keys
gbid 1784562   gene_oid 2677390049   TM×9

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01040

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 8 genomes share architecture group #431  pfam01040

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00467 287 TM pfam01040
Syntrophomonas zehnderi OL-4 Szehn Szeh_02135 ◀ 282 TM pfam01040
Syntrophomonas curvata DSM15682 / GL#14 Scur_01089 282 pfam01040
Syntrophomonas curvata DSM15682 / GL#14 Scur_02299 293 pfam01040
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01151 283 TM pfam01040
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02185 283 TM pfam01040
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01882 282 TM pfam01040
Syntrophomonas wolfei saponavida / SD2 Sws_00325 279 TM pfam01040
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00714 282 TM pfam01040
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00674 282 TM pfam01040
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