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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_01766

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
diaminopimelate epimerase
Gene
dapF
Location
NZ_CGIH01000029.1:68,536–69,381 (+)   281 aa
Keys
gbid 1784949   gene_oid 2677389664   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01678,pfam01678

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

3 proteins across 3 genomes share architecture group #1908  pfam01678,pfam01678

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01766 ◀ 281 TM pfam01678,pfam01678
Syntrophomonas curvata DSM15682 / GL#14 Scur_00800 307 pfam01678,pfam01678
Syntrophomonas wolfei saponavida / SD2 Sws_00891 277 pfam01678,pfam01678
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