Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_01552

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
proline--tRNA ligase
Gene
—
Location
NZ_CGIH01000027.1:108,214–109,920 (+)   568 aa
Keys
gbid 1785382   gene_oid 2677389446  

Domain architecture

Pfam domain
Pfam signature: pfam00587,pfam04073,pfam03129

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #562  pfam00587,pfam03129,pfam04073

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01552 ◀ 568 pfam00587,pfam04073,pfam03129
Syntrophomonas curvata DSM15682 / GL#14 Scur_01253 565 pfam00587,pfam04073,pfam03129
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01001 567 pfam00587,pfam04073,pfam03129
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02338 567 pfam00587,pfam04073,pfam03129
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00989 574 pfam00587,pfam04073,pfam03129
Syntrophomonas wolfei saponavida / SD2 Sws_00100 576 pfam00587,pfam04073,pfam03129
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00972 570 pfam00587,pfam04073,pfam03129
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00892 570 pfam00587,pfam04073,pfam03129
↑ Top




v1.00 @copyright 2026 UCLA