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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02003

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
sigma-54 interaction domain-containing protein
Gene
—
Location
NZ_CGIH01000032.1:113,127–115,019 (−)   630 aa
Keys
gbid 1785427   gene_oid 2677389910  

Domain architecture

Pfam domain
Pfam signature: pfam00158,pfam02954

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

19 proteins across 7 genomes share architecture group #289  pfam00158,pfam02954

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01111 369 pfam00158,pfam02954
Syntrophomonas zehnderi OL-4 Szehn Szeh_02003 ◀ 630 pfam00158,pfam02954
Syntrophomonas zehnderi OL-4 Szehn Szeh_02543 471 pfam00158,pfam02954
Syntrophomonas zehnderi OL-4 Szehn Szeh_02665 645 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_00377 679 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_00771 461 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_00845 716 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_01445 249 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_01822 613 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_01831 624 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_02044 628 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_02550 366 pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_02594 221 pfam00158,pfam02954
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02177 212 pfam00158,pfam02954
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01811 332 pfam00158,pfam02954
Syntrophomonas wolfei saponavida / SD2 Sws_01767 484 pfam00158,pfam02954
Syntrophomonas wolfei saponavida / SD2 Sws_02428 454 pfam00158,pfam02954
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00454 453 pfam00158,pfam02954
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00428 453 pfam00158,pfam02954
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