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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_01084

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
50S ribosomal protein L1
Gene
rplA
Location
NZ_CGIH01000018.1:138,160–138,861 (−)   233 aa
Keys
gbid 1785576   gene_oid 2677388962  

Domain architecture

Pfam domain
Pfam signature: pfam00687

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1272  pfam00687

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01084 ◀ 233 pfam00687
Syntrophomonas curvata DSM15682 / GL#14 Scur_02726 233 pfam00687
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02298 233 pfam00687
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00907 233 pfam00687
Syntrophomonas wolfei saponavida / SD2 Sws_00953 233 pfam00687
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02750 233 pfam00687
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02392 233 pfam00687
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