Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_01397

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
P-II family nitrogen regulator
Gene
—
Location
NZ_CGIH01000026.1:163,537–163,875 (+)   112 aa
Keys
gbid 1785678   gene_oid 2677389281  

Domain architecture

Pfam domain
Pfam signature: pfam00543

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 4 genomes share architecture group #1910  pfam00543

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01397 ◀ 112 pfam00543
Syntrophomonas zehnderi OL-4 Szehn Szeh_01617 127 pfam00543
Syntrophomonas zehnderi OL-4 Szehn Szeh_01618 108 pfam00543
Syntrophomonas curvata DSM15682 / GL#14 Scur_00806 112 pfam00543
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01794 112 pfam00543
Syntrophomonas wolfei saponavida / SD2 Sws_00706 108 pfam00543
Syntrophomonas wolfei saponavida / SD2 Sws_00707 126 pfam00543
Syntrophomonas wolfei saponavida / SD2 Sws_00902 112 pfam00543
Syntrophomonas wolfei saponavida / SD2 Sws_02403 103 pfam00543
Syntrophomonas wolfei saponavida / SD2 Sws_02736 222 pfam00543
↑ Top




v1.00 @copyright 2026 UCLA