Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_02857

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
UDP-N-acetylmuramate dehydrogenase
Gene
murB
Location
NZ_CM161535.1:3,078,024–3,078,923 (+)   299 aa
Keys
gbid 1814096   gene_oid 8099424881  

Domain architecture

Pfam domain
Pfam signature: pfam01565,pfam02873

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #630  pfam01565,pfam02873

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_02857 ◀ 299 pfam01565,pfam02873
Syntrophomonas curvata DSM15682 / GL#14 Scur_01536 299 pfam01565,pfam02873
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00702 299 pfam01565,pfam02873
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01826 293 pfam01565,pfam02873
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01118 299 pfam01565,pfam02873
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01017 299 pfam01565,pfam02873
Syntrophomonas zehnderi OL-4 Szehn Szeh_01186 299 pfam01565,pfam02873
↑ Top




v1.00 @copyright 2026 UCLA