Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00657

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ABC transporter ATP-binding protein
Gene
—
Location
NZ_BBCE01000004.1:70,845–71,726 (−)   293 aa
Keys
gbid 1814300   gene_oid 2731399066  

Domain architecture

Pfam domain
Pfam signature: pfam00005,pfam13732

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 5 genomes share architecture group #1009  pfam00005,pfam13732

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00657 ◀ 293 pfam00005,pfam13732
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01746 308 pfam00005,pfam13732
Syntrophomonas wolfei saponavida / SD2 Sws_02716 293 pfam00005,pfam13732
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01448 334 pfam00005,pfam13732
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01755 308 pfam00005,pfam13732
Syntrophomonas zehnderi OL-4 Szehn Szeh_00196 302 pfam00005,pfam13732
Syntrophomonas zehnderi OL-4 Szehn Szeh_01094 335 pfam00005,pfam13732
Syntrophomonas zehnderi OL-4 Szehn Szeh_02208 299 pfam00005,pfam13732
↑ Top




v1.00 @copyright 2026 UCLA