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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00679

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
M23 family metallopeptidase
Gene
—
Location
NZ_BBCE01000004.1:94,778–95,647 (+)   289 aa
Keys
gbid 1814304   gene_oid 2731399094   SignalP TM×1

Domain architecture

CBM Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam01476,pfam01476,pfam01551

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1306  pfam01476,pfam01476,pfam01551

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00679 ◀ 289 SPTM pfam01476,pfam01476,pfam01551
Syntrophomonas curvata DSM15682 / GL#14 Scur_02782 284 SP pfam01476,pfam01476,pfam01551
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02240 284 SPTM pfam01476,pfam01476,pfam01551
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00967 284 SPTM pfam01476,pfam01476,pfam01551
Syntrophomonas wolfei saponavida / SD2 Sws_01014 285 TM pfam01476,pfam01476,pfam01551
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02814 283 SP pfam01476,pfam01476,pfam01551
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02452 283 SP pfam01476,pfam01476,pfam01551
Syntrophomonas zehnderi OL-4 Szehn Szeh_00221 283 pfam01476,pfam01476,pfam01551
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