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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01152

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
4-hydroxy-tetrahydrodipicolinate synthase
Gene
dapA
Location
NZ_BBCE01000008.1:60,345–61,211 (−)   288 aa
Keys
gbid 1814401   gene_oid 2731399656  

Domain architecture

Pfam domain
Pfam signature: pfam00701

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #773  pfam00701

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01152 ◀ 288 pfam00701
Syntrophomonas curvata DSM15682 / GL#14 Scur_01647 295 pfam00701
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00564 292 pfam00701
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00205 292 pfam00701
Syntrophomonas wolfei saponavida / SD2 Sws_02536 292 pfam00701
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01424 292 pfam00701
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01281 292 pfam00701
Syntrophomonas zehnderi OL-4 Szehn Szeh_01742 291 pfam00701
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