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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_02470

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
cadherin repeat domain-containing protein
Gene
—
Location
NZ_BBCE01000060.1:1–550 (−)   183 aa
Keys
gbid 1814691   gene_oid 2731401156   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam18889,pfam18889,pfam18889,pfam18889,pfam18889,pfam13205

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 1 genomes share architecture group #3023  pfam13205,pfam18889,pfam18889,pfam18889,pfam18889,pfam18889

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02440 629 SPTM pfam18889,pfam18889,pfam18889,pfam18889,pfam18889,pfam13205
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02470 ◀ 183 SPTM pfam18889,pfam18889,pfam18889,pfam18889,pfam18889,pfam13205
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