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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_00692

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
helix-turn-helix transcriptional regulator
Gene
—
Location
NZ_CGIH01000009.1:103,206–104,759 (−)   517 aa
Keys
gbid 1814772   gene_oid 2677388555   TM×2

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00196

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

17 proteins across 8 genomes share architecture group #661  pfam00196

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00692 ◀ 517 TM pfam00196
Syntrophomonas curvata DSM15682 / GL#14 Scur_01483 420 pfam00196
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00842 464 TM pfam00196
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01914 471 TM pfam00196
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01409 471 TM pfam00196
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01474 68 pfam00196
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02504 464 TM pfam00196
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01052 333 TM pfam00196
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02261 237 pfam00196
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02309 137 pfam00196
Syntrophomonas wolfei saponavida / SD2 Sws_00424 826 pfam00196
Syntrophomonas wolfei saponavida / SD2 Sws_01680 819 pfam00196
Syntrophomonas wolfei saponavida / SD2 Sws_02299 633 TM pfam00196
Syntrophomonas wolfei saponavida / SD2 Sws_02349 823 pfam00196
Syntrophomonas wolfei saponavida / SD2 Sws_02589 538 TM pfam00196
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01210 828 pfam00196
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01083 823 pfam00196
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