Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_00052

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
YhcN/YlaJ family sporulation lipoprotein
Gene
—
Location
NC_008346.1:62,406–63,020 (+)   204 aa
Keys
gbid 48646   gene_oid 638136955   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam09580

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #39  pfam09580

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00052 ◀ 204 SPTM pfam09580
Syntrophomonas curvata DSM15682 / GL#14 Scur_00055 220 SP pfam09580
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02103 201 SP pfam09580
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02381 147 SPTM pfam09580
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00823 147 SPTM pfam09580
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01158 201 SPTM pfam09580
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01319 199 SP pfam09580
Syntrophomonas wolfei saponavida / SD2 Sws_01201 170 SP pfam09580
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00049 204 SPTM pfam09580
Syntrophomonas zehnderi OL-4 Szehn Szeh_00408 185 SP pfam09580
Syntrophomonas zehnderi OL-4 Szehn Szeh_00802 159 SPTM pfam09580
↑ Top




v1.00 @copyright 2026 UCLA