◀ domain architecture  ·  operons  ·  ❔ guide

Swg_00123

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
LCP family protein
Gene
Location
NC_008346.1:133,865–135,007 (+)   380 aa
Keys
gbid 48875   gene_oid 638137025   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam03816

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

19 proteins across 8 genomes share architecture group #91  pfam03816

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00123 380 TM pfam03816
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01953 406 TM pfam03816
Syntrophomonas curvata DSM15682 / GL#14 Scur_00206 372 pfam03816
Syntrophomonas curvata DSM15682 / GL#14 Scur_00684 418 pfam03816
Syntrophomonas curvata DSM15682 / GL#14 Scur_00685 294 pfam03816
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00332 415 TM pfam03816
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02020 392 TM pfam03816
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00438 415 TM pfam03816
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01242 392 TM pfam03816
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01237 370 TM pfam03816
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01968 417 TM pfam03816
Syntrophomonas wolfei saponavida / SD2 Sws_01262 377 TM pfam03816
Syntrophomonas wolfei saponavida / SD2 Sws_01796 431 TM pfam03816
Syntrophomonas wolfei saponavida / SD2 Sws_02770 312 TM pfam03816
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00124 376 TM pfam03816
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02231 406 TM pfam03816
Syntrophomonas zehnderi OL-4 Szehn Szeh_00037 297 TM pfam03816
Syntrophomonas zehnderi OL-4 Szehn Szeh_00479 356 TM pfam03816
Syntrophomonas zehnderi OL-4 Szehn Szeh_00903 396 TM pfam03816
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