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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_00261

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
RNA polymerase factor sigma-54
Gene
rpoN
Location
NC_008346.1:307,690–309,075 (+)   461 aa
Keys
gbid 49276   gene_oid 638137158  

Domain architecture

Pfam domain
Pfam signature: pfam00309,pfam04963,pfam04552

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #185  pfam00309,pfam04552,pfam04963

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00261 ◀ 461 pfam00309,pfam04963,pfam04552
Syntrophomonas curvata DSM15682 / GL#14 Scur_00321 459 pfam00309,pfam04963,pfam04552
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01935 462 pfam00309,pfam04963,pfam04552
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01327 462 pfam00309,pfam04963,pfam04552
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00842 461 pfam00309,pfam04963,pfam04552
Syntrophomonas wolfei saponavida / SD2 Sws_01343 463 pfam00309,pfam04963,pfam04552
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00238 461 pfam00309,pfam04963,pfam04552
Syntrophomonas zehnderi OL-4 Szehn Szeh_02342 463 pfam00309,pfam04963,pfam04552
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