Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_00526

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
type II secretion system F family protein
Gene
—
Location
NC_008346.1:632,684–633,892 (+)   402 aa
Keys
gbid 50624   gene_oid 638137417   TM×5

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00482,pfam00482

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #348  pfam00482,pfam00482

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00526 ◀ 402 TM pfam00482,pfam00482
Syntrophomonas curvata DSM15682 / GL#14 Scur_00958 405 pfam00482,pfam00482
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01319 403 TM pfam00482,pfam00482
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02008 403 TM pfam00482,pfam00482
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00290 319 TM pfam00482,pfam00482
Syntrophomonas wolfei saponavida / SD2 Sws_00431 387 TM pfam00482,pfam00482
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00550 402 TM pfam00482,pfam00482
↑ Top




v1.00 @copyright 2026 UCLA