Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_02009

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
group II intron reverse transcriptase/maturase
Gene
ltrA
Location
NC_008346.1:2,254,331–2,255,779 (−)   482 aa
Keys
gbid 52254   gene_oid 638137908  

Domain architecture

Pfam domain
Pfam signature: pfam00078,pfam08388

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 4 genomes share architecture group #1002  pfam00078,pfam08388

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01740 443 pfam00078,pfam08388
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02009 ◀ 482 pfam00078,pfam08388
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02508 443 pfam00078,pfam08388
Syntrophomonas curvata DSM15682 / GL#14 Scur_01844 414 pfam00078,pfam08388
Syntrophomonas wolfei saponavida / SD2 Sws_02499 413 pfam00078,pfam08388
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01990 415 pfam00078,pfam08388
↑ Top




v1.00 @copyright 2026 UCLA