Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_01096

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
TrmH family RNA methyltransferase
Gene
—
Location
NC_008346.1:1,257,370–1,258,164 (+)   264 aa
Keys
gbid 52657   gene_oid 638137963  

Domain architecture

Pfam domain
Pfam signature: pfam08032,pfam00588

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 7 genomes share architecture group #673  pfam00588,pfam08032

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01096 ◀ 264 pfam08032,pfam00588
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02399 248 pfam08032,pfam00588
Syntrophomonas curvata DSM15682 / GL#14 Scur_02733 248 pfam08032,pfam00588
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02290 244 pfam08032,pfam00588
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00917 244 pfam08032,pfam00588
Syntrophomonas wolfei saponavida / SD2 Sws_00960 255 pfam08032,pfam00588
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02757 248 pfam08032,pfam00588
Syntrophomonas zehnderi OL-4 Szehn Szeh_00270 248 pfam08032,pfam00588
Syntrophomonas zehnderi OL-4 Szehn Szeh_01367 255 pfam08032,pfam00588
↑ Top




v1.00 @copyright 2026 UCLA