Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_01456

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
YebC/PmpR family DNA-binding transcriptional regulator
Gene
—
Location
NC_008346.1:1,644,491–1,645,246 (−)   251 aa
Keys
gbid 53895   gene_oid 638138315  

Domain architecture

Pfam domain
Pfam signature: pfam01709

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #863  pfam01709

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01456 ◀ 251 pfam01709
Syntrophomonas zehnderi OL-4 Szehn Szeh_02190 250 pfam01709
↑ Top




v1.00 @copyright 2026 UCLA