Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_00285

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
HNH endonuclease
Gene
—
Location
NZ_CM161534.1:322,693–323,049 (−)   118 aa
Keys
gbid 937184   gene_oid 8108582360  

Domain architecture

Pfam domain
Pfam signature: pfam01844

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 6 genomes share architecture group #1200  pfam01844

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00285 ◀ 118 pfam01844
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00785 119 pfam01844
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02565 119 pfam01844
Syntrophomonas wolfei saponavida / SD2 Sws_00014 282 pfam01844
Syntrophomonas wolfei saponavida / SD2 Sws_02684 261 pfam01844
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02231 274 pfam01844
Syntrophomonas zehnderi OL-4 Szehn Szeh_00962 118 pfam01844
Syntrophomonas zehnderi OL-4 Szehn Szeh_02248 119 pfam01844
↑ Top




v1.00 @copyright 2026 UCLA