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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_00093

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
formate/nitrite transporter family protein
Gene
—
Location
NZ_CM161534.1:96,735–97,616 (+)   293 aa
Keys
gbid 937270   gene_oid 8108582158   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01226

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 8 genomes share architecture group #66  pfam01226

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00093 ◀ 293 TM pfam01226
Syntrophomonas curvata DSM15682 / GL#14 Scur_00172 297 pfam01226
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00659 301 TM pfam01226
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00121 301 TM pfam01226
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01272 310 TM pfam01226
Syntrophomonas wolfei saponavida / SD2 Sws_00831 309 TM pfam01226
Syntrophomonas wolfei saponavida / SD2 Sws_02335 309 TM pfam01226
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00091 293 TM pfam01226
Syntrophomonas zehnderi OL-4 Szehn Szeh_02546 238 TM pfam01226
Syntrophomonas zehnderi OL-4 Szehn Szeh_02655 296 TM pfam01226
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