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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_00125

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
SH3 domain-containing protein
Gene
—
Location
NZ_CM161534.1:133,438–136,149 (+)   903 aa
Keys
gbid 937302   gene_oid 8108582190   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam08239,pfam08239,pfam08239,pfam07833,pfam08239,pfam01520

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #92  pfam01520,pfam07833,pfam08239,pfam08239,pfam08239,pfam08239

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00125 ◀ 903 SPTM pfam08239,pfam08239,pfam08239,pfam07833,pfam08239,pfam01520
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00124 907 TM pfam08239,pfam08239,pfam08239,pfam07833,pfam08239,pfam01520
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