Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_00946

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
flagellar biosynthesis protein FliQ
Gene
fliQ
Location
NZ_CM161534.1:1,044,517–1,044,789 (+)   90 aa
Keys
gbid 938142   gene_oid 8108583060   TM×2

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01313

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #542  pfam01313

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00946 ◀ 90 TM pfam01313
Syntrophomonas curvata DSM15682 / GL#14 Scur_01227 90 pfam01313
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01027 90 TM pfam01313
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02309 90 TM pfam01313
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01014 93 TM pfam01313
Syntrophomonas wolfei saponavida / SD2 Sws_00126 90 TM pfam01313
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00866 90 TM pfam01313
Syntrophomonas zehnderi OL-4 Szehn Szeh_01526 84 TM pfam01313
↑ Top




v1.00 @copyright 2026 UCLA