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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_01266

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
non-homologous end-joining DNA ligase
Gene
ligD
Location
NZ_CM161534.1:1,425,090–1,425,998 (+)   302 aa
Keys
gbid 938473   gene_oid 8108583412  

Domain architecture

Pfam domain
Pfam signature: pfam21686

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #1550  pfam21686

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01266 ◀ 302 pfam21686
Syntrophomonas curvata DSM15682 / GL#14 Scur_00907 314 pfam21686
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00431 307 pfam21686
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00337 307 pfam21686
Syntrophomonas wolfei saponavida / SD2 Sws_00513 79 pfam21686
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