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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_01334

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
LysR family transcriptional regulator
Gene
—
Location
NZ_CM161534.1:1,511,712–1,512,584 (−)   290 aa
Keys
gbid 938543   gene_oid 8108583484  

Domain architecture

Pfam domain
Pfam signature: pfam00126,pfam03466

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

24 proteins across 8 genomes share architecture group #423  pfam00126,pfam03466

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00701 295 pfam00126,pfam03466
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01016 307 pfam00126,pfam03466
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01334 ◀ 290 pfam00126,pfam03466
Syntrophomonas curvata DSM15682 / GL#14 Scur_01072 301 pfam00126,pfam03466
Syntrophomonas curvata DSM15682 / GL#14 Scur_01416 307 pfam00126,pfam03466
Syntrophomonas curvata DSM15682 / GL#14 Scur_01441 314 pfam00126,pfam03466
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00217 309 pfam00126,pfam03466
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00885 316 pfam00126,pfam03466
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01174 295 pfam00126,pfam03466
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00554 309 pfam00126,pfam03466
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02159 295 pfam00126,pfam03466
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02455 316 pfam00126,pfam03466
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01405 306 pfam00126,pfam03466
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01787 296 pfam00126,pfam03466
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01863 296 pfam00126,pfam03466
Syntrophomonas wolfei saponavida / SD2 Sws_00335 295 pfam00126,pfam03466
Syntrophomonas wolfei saponavida / SD2 Sws_01603 301 pfam00126,pfam03466
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00661 295 pfam00126,pfam03466
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00934 307 pfam00126,pfam03466
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01199 290 pfam00126,pfam03466
Syntrophomonas zehnderi OL-4 Szehn Szeh_00786 298 pfam00126,pfam03466
Syntrophomonas zehnderi OL-4 Szehn Szeh_01100 307 pfam00126,pfam03466
Syntrophomonas zehnderi OL-4 Szehn Szeh_01228 265 pfam00126,pfam03466
Syntrophomonas zehnderi OL-4 Szehn Szeh_01234 309 pfam00126,pfam03466
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