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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_01404

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
ribonuclease Y
Gene
rny
Location
NZ_CM161534.1:1,582,306–1,583,853 (−)   515 aa
Keys
gbid 938615   gene_oid 8108583560   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam12072,pfam00013,pfam01966

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #1566  pfam00013,pfam01966,pfam12072

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01404 ◀ 515 TM pfam12072,pfam00013,pfam01966
Syntrophomonas curvata DSM15682 / GL#14 Scur_01631 512 pfam12072,pfam00013,pfam01966
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01136 505 TM pfam12072,pfam00013,pfam01966
Syntrophomonas wolfei saponavida / SD2 Sws_02554 509 pfam12072,pfam00013,pfam01966
Syntrophomonas zehnderi OL-4 Szehn Szeh_01756 513 TM pfam12072,pfam00013,pfam01966
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