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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_01436

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
carbamoyl-phosphate synthase large subunit
Gene
carB
Location
NZ_CM161534.1:1,621,269–1,624,493 (−)   1074 aa
Keys
gbid 938648   gene_oid 8108583593  

Domain architecture

Pfam domain
Pfam signature: pfam02786,pfam02787,pfam02786,pfam02142

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 8 genomes share architecture group #782  pfam02142,pfam02786,pfam02786,pfam02787

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01436 ◀ 1074 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas curvata DSM15682 / GL#14 Scur_01660 1074 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00551 1074 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00218 1074 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02022 1075 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas wolfei saponavida / SD2 Sws_00839 1077 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas wolfei saponavida / SD2 Sws_02523 1072 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01293 1074 pfam02786,pfam02787,pfam02786,pfam02142
Syntrophomonas zehnderi OL-4 Szehn Szeh_01727 1071 pfam02786,pfam02787,pfam02786,pfam02142
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