Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_02696

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
Gene
tsaA
Location
NZ_CM161534.1:2,978,567–2,979,364 (−)   265 aa
Keys
gbid 939917   gene_oid 8108584942  

Domain architecture

Pfam domain
Pfam signature: pfam01980

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 6 genomes share architecture group #1230  pfam01980

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02696 ◀ 265 pfam01980
Syntrophomonas curvata DSM15682 / GL#14 Scur_00607 280 pfam01980
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01523 282 pfam01980
Syntrophomonas wolfei saponavida / SD2 Sws_01763 273 pfam01980
Syntrophomonas wolfei saponavida / SD2 Sws_03090 268 pfam01980
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02339 265 pfam01980
Syntrophomonas zehnderi OL-4 Szehn Szeh_01470 140 pfam01980
Syntrophomonas zehnderi OL-4 Szehn Szeh_02677 158 pfam01980
↑ Top




v1.00 @copyright 2026 UCLA