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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_02699

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
N-acetylmuramoyl-L-alanine amidase CwlD
Gene
cwlD
Location
NZ_CM161534.1:2,982,841–2,983,620 (−)   259 aa
Keys
gbid 939920   gene_oid 8108584945   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01520

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

12 proteins across 8 genomes share architecture group #1232  pfam01520

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00258 233 pfam01520
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02699 ◀ 259 TM pfam01520
Syntrophomonas curvata DSM15682 / GL#14 Scur_02671 249 SP pfam01520
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02348 247 TM pfam01520
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00857 247 TM pfam01520
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01354 233 pfam01520
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01728 249 TM pfam01520
Syntrophomonas wolfei saponavida / SD2 Sws_00906 251 TM pfam01520
Syntrophomonas wolfei saponavida / SD2 Sws_01868 230 pfam01520
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02342 259 TM pfam01520
Syntrophomonas zehnderi OL-4 Szehn Szeh_01030 263 TM pfam01520
Syntrophomonas zehnderi OL-4 Szehn Szeh_01652 237 pfam01520
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