◀ domain architecture  ·  operons  ·  ❔ guide

Swm_02898

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
ABC transporter substrate-binding protein
Gene
Location
NZ_CM161534.1:3,161,426–3,162,469 (+)   347 aa
Keys
gbid 940116   gene_oid 8108585152   SignalP

Domain architecture

Pfam domain ▏signal peptide
Pfam signature: pfam13343

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 3 genomes share architecture group #992  pfam13343

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01913 288 pfam13343
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02895 364 SP pfam13343
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02898 347 SP pfam13343
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01716 291 pfam13343
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02527 347 SP pfam13343
Syntrophomonas zehnderi OL-4 Szehn Szeh_01198 312 pfam13343
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