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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_00907

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
D-alanine--D-alanine ligase
Gene
—
Location
NZ_CM128632.1:1,019,339–1,020,274 (−)   311 aa
Keys
gbid 946262   gene_oid 8030287529  

Domain architecture

Pfam domain
Pfam signature: pfam01820,pfam07478

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 7 genomes share architecture group #711  pfam01820,pfam07478

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00907 ◀ 311 pfam01820,pfam07478
Syntrophomonas curvata DSM15682 / GL#14 Scur_01419 306 pfam01820,pfam07478
Syntrophomonas curvata DSM15682 / GL#14 Scur_01578 349 pfam01820,pfam07478
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02433 311 pfam01820,pfam07478
Syntrophomonas wolfei saponavida / SD2 Sws_02908 390 pfam01820,pfam07478
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01296 309 pfam01820,pfam07478
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01160 309 pfam01820,pfam07478
Syntrophomonas zehnderi OL-4 Szehn Szeh_00032 317 pfam01820,pfam07478
Syntrophomonas zehnderi OL-4 Szehn Szeh_00177 348 pfam01820,pfam07478
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