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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_01084

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
aspartate--tRNA ligase
Gene
aspS
Location
NZ_CM128632.1:1,214,062–1,215,822 (−)   586 aa
Keys
gbid 946443   gene_oid 8030287716  

Domain architecture

Pfam domain
Pfam signature: pfam01336,pfam00152,pfam02938

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #503  pfam00152,pfam01336,pfam02938

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01084 ◀ 586 pfam01336,pfam00152,pfam02938
Syntrophomonas curvata DSM15682 / GL#14 Scur_01167 586 pfam01336,pfam00152,pfam02938
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02252 586 pfam01336,pfam00152,pfam02938
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01081 586 pfam01336,pfam00152,pfam02938
Syntrophomonas wolfei saponavida / SD2 Sws_00193 585 pfam01336,pfam00152,pfam02938
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00891 586 pfam01336,pfam00152,pfam02938
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00808 586 pfam01336,pfam00152,pfam02938
Syntrophomonas zehnderi OL-4 Szehn Szeh_01463 586 pfam01336,pfam00152,pfam02938
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