Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_01777

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
GIY-YIG nuclease family protein
Gene
—
Location
NZ_CM128632.1:1,965,217–1,965,462 (−)   81 aa
Keys
gbid 947140   gene_oid 8030288450  

Domain architecture

Pfam domain
Pfam signature: pfam01541

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1322  pfam01541

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01777 ◀ 81 pfam01541
Syntrophomonas curvata DSM15682 / GL#14 Scur_00507 88 pfam01541
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01556 81 pfam01541
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00517 95 pfam01541
Syntrophomonas wolfei saponavida / SD2 Sws_01704 85 pfam01541
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02836 83 pfam01541
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02473 83 pfam01541
Syntrophomonas zehnderi OL-4 Szehn Szeh_02696 96 pfam01541
↑ Top




v1.00 @copyright 2026 UCLA