◀ domain architecture  ·  operons  ·  ❔ guide

Ser_01950

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
PDZ domain-containing protein
Gene
Location
NZ_CM128632.1:2,142,651–2,143,886 (−)   411 aa
Keys
gbid 947311   gene_oid 8030288626   TM×8

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam13180

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #175  pfam13180

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01950 411 TM pfam13180
Syntrophomonas curvata DSM15682 / GL#14 Scur_00299 412 pfam13180
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01312 411 TM pfam13180
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00948 105 pfam13180
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00247 405 TM pfam13180
↑ Top





v1.00 @copyright 2026 UCLA