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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_01955

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
transketolase family protein
Gene
—
Location
NZ_CM128632.1:2,148,261–2,149,202 (−)   313 aa
Keys
gbid 947316   gene_oid 8030288631  

Domain architecture

Pfam domain
Pfam signature: pfam02779,pfam02780

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 8 genomes share architecture group #172  pfam02779,pfam02780

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01268 324 pfam02779,pfam02780
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01955 ◀ 313 pfam02779,pfam02780
Syntrophomonas curvata DSM15682 / GL#14 Scur_00294 314 pfam02779,pfam02780
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01307 313 pfam02779,pfam02780
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02059 324 pfam02779,pfam02780
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00828 308 TM pfam02779,pfam02780
Syntrophomonas wolfei saponavida / SD2 Sws_01326 311 TM pfam02779,pfam02780
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00220 311 pfam02779,pfam02780
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00242 311 pfam02779,pfam02780
Syntrophomonas zehnderi OL-4 Szehn Szeh_02360 311 pfam02779,pfam02780
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