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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_02073

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
transcription-repair coupling factor
Gene
mfd
Location
NZ_CM128632.1:2,282,839–2,286,045 (−)   1068 aa
Keys
gbid 947433   gene_oid 8030288749  

Domain architecture

Pfam domain
Pfam signature: pfam17757,pfam02559,pfam00270,pfam00271,pfam03461

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #52  pfam00270,pfam00271,pfam02559,pfam03461,pfam17757

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02073 ◀ 1068 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas curvata DSM15682 / GL#14 Scur_00153 1069 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01188 1068 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01293 1068 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas wolfei saponavida / SD2 Sws_01219 1068 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00072 1071 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00073 1071 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
Syntrophomonas zehnderi OL-4 Szehn Szeh_00432 1071 pfam17757,pfam02559,pfam00270,pfam00271,pfam03461
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