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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_02191

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
peptidoglycan DD-metalloendopeptidase family protein
Gene
—
Location
NZ_CM128632.1:2,401,873–2,403,216 (+)   447 aa
Keys
gbid 947550   gene_oid 8030288888   TM×1

Domain architecture

CBM Pfam domain ▮ TM helix
Pfam signature: pfam01476,pfam07501,pfam01551

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1337  pfam01476,pfam01551,pfam07501

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02191 ◀ 447 TM pfam01476,pfam07501,pfam01551
Syntrophomonas curvata DSM15682 / GL#14 Scur_02848 447 pfam01476,pfam07501,pfam01551
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01020 447 TM pfam01476,pfam07501,pfam01551
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01697 450 TM pfam01476,pfam07501,pfam01551
Syntrophomonas wolfei saponavida / SD2 Sws_01047 423 TM pfam01476,pfam07501,pfam01551
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02887 446 TM pfam01476,pfam07501,pfam01551
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02518 446 TM pfam01476,pfam07501,pfam01551
Syntrophomonas zehnderi OL-4 Szehn Szeh_00154 429 TM pfam01476,pfam07501,pfam01551
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