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◀ domain architecture  ·  operons  ·  ❔ guide
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Ser_02303

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-directed RNA polymerase subunit beta'
Gene
rpoC
Location
NZ_CM128632.1:2,519,550–2,523,056 (+)   1168 aa
Keys
gbid 947661   gene_oid 8030289010  

Domain architecture

Pfam domain
Pfam signature: pfam04997,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #2396  pfam00623,pfam04983,pfam04997,pfam04998,pfam04998,pfam05000

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02303 ◀ 1168 pfam04997,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00902 1168 pfam04997,pfam00623,pfam04983,pfam05000,pfam04998,pfam04998
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