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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_01350

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
NAD-dependent DNA ligase LigA
Gene
ligA
Location
NZ_BBCE01000010.1:20,788–22,767 (+)   659 aa
Keys
gbid 1775706   gene_oid 2731399883  

Domain architecture

Pfam domain
Pfam signature: pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533

Putative operon (same contig + strand, gap ≤ 300 bp)

Spalm_01347 Spalm_01348 Spalm_01349 Spalm_01350 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1441  pfam00533,pfam01653,pfam03119,pfam03120,pfam12826,pfam14520,pfam22745

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01350 ◀ 659 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas curvata DSM15682 / GL#14 Scur_00798 660 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00370 664 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00398 664 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas wolfei saponavida / SD2 Sws_00576 669 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00409 661 pfam22745,pfam01653,pfam03120,pfam03119,pfam14520,pfam12826,pfam00533
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