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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00768

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
TolC family protein
Gene
—
Location
NZ_BBCE01000005.1:27,902–29,023 (+)   373 aa
Keys
gbid 1775887   gene_oid 2731399194   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam02321,pfam02321

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #100  pfam02321,pfam02321

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00768 ◀ 373 SPTM pfam02321,pfam02321
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02012 407 SPTM pfam02321,pfam02321
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01250 407 SPTM pfam02321,pfam02321
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00133 400 SPTM pfam02321,pfam02321
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00132 394 SPTM pfam02321,pfam02321
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