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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_01756

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
ribonuclease Y
Gene
rny
Location
NZ_CGIH01000029.1:57,579–59,120 (+)   513 aa
Keys
gbid 1814902   gene_oid 2677389654   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam12072,pfam00013,pfam01966

Putative operon (same contig + strand, gap ≤ 300 bp)

Monocistronic at this threshold — no co-oriented neighbour within 300 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #1566  pfam00013,pfam01966,pfam12072

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01756 ◀ 513 TM pfam12072,pfam00013,pfam01966
Syntrophomonas curvata DSM15682 / GL#14 Scur_01631 512 pfam12072,pfam00013,pfam01966
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01136 505 TM pfam12072,pfam00013,pfam01966
Syntrophomonas wolfei saponavida / SD2 Sws_02554 509 pfam12072,pfam00013,pfam01966
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01404 515 TM pfam12072,pfam00013,pfam01966
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