Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_00100

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
3-methyl-2-oxobutanoate hydroxymethyltransferase
Gene
panB
Location
NC_008346.1:109,519–110,349 (+)   276 aa
Keys
gbid 48725   gene_oid 638137003  

Domain architecture

Pfam domain
Pfam signature: pfam02548

Putative operon (same contig + strand, gap ≤ 300 bp)

Swg_00094 Swg_00095 Swg_00096 Swg_00097 Swg_00098 Swg_00099 Swg_00100 ◀ Swg_00101 Swg_00102 Swg_00103 Swg_00104 Swg_00105 Swg_00106 Swg_00107 Swg_00108 Swg_00109   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #75  pfam02548

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00100 ◀ 276 pfam02548
Syntrophomonas curvata DSM15682 / GL#14 Scur_00182 276 pfam02548
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02045 276 pfam02548
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01216 276 pfam02548
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01263 276 pfam02548
Syntrophomonas wolfei saponavida / SD2 Sws_01245 276 pfam02548
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00102 276 pfam02548
Syntrophomonas zehnderi OL-4 Szehn Szeh_00459 276 pfam02548
↑ Top




v1.00 @copyright 2026 UCLA