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◀ domain architecture  ·  operons  ·  ❔ guide
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Scur_00927

smpp Syntrophomonas curvata DSM15682
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
alanine--tRNA ligase
Gene
alaS
Location
NZ_CM129641.1:1,105,344–1,107,980 (+)   878 aa
Keys
gbid 1571193   gene_oid 8025904877  

Domain architecture

Pfam domain
Pfam signature: pfam01411,pfam07973,pfam02272

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #307  pfam01411,pfam02272,pfam07973

GenomeLocusaaSP/TMPfam order
Syntrophomonas curvata DSM15682 / GL#14 Scur_00927 ◀ 878 pfam01411,pfam07973,pfam02272
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00447 879 pfam01411,pfam07973,pfam02272
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00321 879 pfam01411,pfam07973,pfam02272
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01427 878 pfam01411,pfam07973,pfam02272
Syntrophomonas wolfei saponavida / SD2 Sws_00500 881 pfam01411,pfam07973,pfam02272
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00480 880 pfam01411,pfam07973,pfam02272
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00457 880 pfam01411,pfam07973,pfam02272
Syntrophomonas zehnderi OL-4 Szehn Szeh_00664 879 pfam01411,pfam07973,pfam02272
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