◀ domain architecture  ·  operons  ·  ❔ guide

Scur_02248

smpp Syntrophomonas curvata DSM15682
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
L,D-transpeptidase family protein
Gene
Location
NZ_CM129641.1:2,550,429–2,551,271 (+)   280 aa
Keys
gbid 1572532   gene_oid 8025906290  

Domain architecture

Pfam domain
Pfam signature: pfam01471,pfam03734,pfam01471

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 4 genomes share architecture group #1632  pfam01471,pfam01471,pfam03734

GenomeLocusaaSP/TMPfam order
Syntrophomonas curvata DSM15682 / GL#14 Scur_02248 280 pfam01471,pfam03734,pfam01471
Syntrophomonas curvata DSM15682 / GL#14 Scur_02396 320 pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei saponavida / SD2 Sws_01714 321 SPTM pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei saponavida / SD2 Sws_01910 281 pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01893 283 pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02200 329 TM pfam01471,pfam03734,pfam01471
Syntrophomonas zehnderi OL-4 Szehn Szeh_00864 319 pfam01471,pfam03734,pfam01471
Syntrophomonas zehnderi OL-4 Szehn Szeh_01876 283 pfam01471,pfam03734,pfam01471
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