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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_01893

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
L,D-transpeptidase family protein
Gene
—
Location
NZ_CM161534.1:2,088,658–2,089,509 (+)   283 aa
Keys
gbid 939108   gene_oid 8108584078  

Domain architecture

Pfam domain
Pfam signature: pfam01471,pfam03734,pfam01471

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 4 genomes share architecture group #1632  pfam01471,pfam01471,pfam03734

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01893 ◀ 283 pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02200 329 TM pfam01471,pfam03734,pfam01471
Syntrophomonas curvata DSM15682 / GL#14 Scur_02248 280 pfam01471,pfam03734,pfam01471
Syntrophomonas curvata DSM15682 / GL#14 Scur_02396 320 pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei saponavida / SD2 Sws_01714 321 SPTM pfam01471,pfam03734,pfam01471
Syntrophomonas wolfei saponavida / SD2 Sws_01910 281 pfam01471,pfam03734,pfam01471
Syntrophomonas zehnderi OL-4 Szehn Szeh_00864 319 pfam01471,pfam03734,pfam01471
Syntrophomonas zehnderi OL-4 Szehn Szeh_01876 283 pfam01471,pfam03734,pfam01471
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